1. Qin Y*, Sun ML*, Li WW, Xu MQ, Shao L, Liu YQ, Zhao GN, Liu ZP, Xu ZP, You JQ, Ye ZX, Xu JW, Yang XY, Wang MJ, Lindsey K, Zhang XL, and Tu LL#. Single-cell RNA-seq reveals fate determination control of an individual fiber cell initiation in cotton (Gossypium hirsutum). Plant Biotechnology Journal, 2022, 20(12): 2372-2388. IF=13.26, 中科院SCI期刊分区：植物科学1区。

2. Qin Y*, Sun HR, Hao PB, Wang HT, Wang CC, Ma L, Wei HL#, and Yu SX#. Transcriptome analysis reveals differences in the mechanisms of fiber initiation and elongation between long- and short-fiber cotton (Gossypium hirsutum L.) lines. BMC Genomics, 2019, 20: 633. IF=3.594, 中科院SCI期刊分区：生物学2区。

3. Qin Y*, Wei HL, Sun HR, Hao PB, Wang HT, Su JJ, Yu SX#. Proteomic Analysis of Differences in Fiber Development between Wild and Cultivated Gossypium hirsutum L. Journal of Proteome Research, 2017, 16: 2811-2824. IF=3.95, 中科院SCI期刊分区：生化研究方法2区。

4. Yuanhao Ding*, Wei Gao*, Yuan Qin*, Xinping Li*, Zhennan Zhang, Wenjie Lai, Yong Yang, Kai Guo, Ping Li, Shihan Zhou, Haiyan Hu#. Single-cell RNA landscape of the special fiber initiation process in Bombax ceiba, Plant Communications, 2023, https://doi.org/10.1016/j.xplc.2023.100554. IF=8.625, 中科院SCI期刊分区：植物科学1区。

5. Xu ZP*, Wang QQ, Zhu XQ, Wang GY, Qin Y, Ding F#, Tu LL, Daniell H, Zhang XL, and Jin SX#. Plant Single Cell Transcriptome Hub (PsctH): an integrated online tool to explore the plant single-cell transcriptome landscape. Plant Biotechnology Journal, 2022, 20: 10-12. IF=13.26, 中科院SCI期刊分区：植物科学1区。

6. Li TY*, Wang FQ, Yasir M, Li K, Qin Y, Zheng J, Luo K, Zhu SH, Zhang H, Jiang YR, Zhang YS#, and Rong JK#.  Expression Patterns Divergence of Reciprocal F(1) Hybrids Between Gossypium hirsutum and Gossypium barbadense Reveals Overdominance Mediating Interspecific Biomass Heterosis. Frontiers in Plant Science, 2022.13: 892805. IF=6.627, 中科院SCI期刊分区：植物科学1区。

7. Yuan R*, Cao YF*, Li TY, Yang F, Yu L, Qin Y, Du XM, Liu F, Ding M, Jiang YR, Zhang H, Paterson AH, and Rong JK#. Differentiation in the genetic basis of stem trichome development between cultivated tetraploid cotton species. BMC Plant Biology, 2021, 21: 115. IF=5.26, 中科院SCI期刊分区：植物科学2区。

8. Zhang M*, Liu J, Ma Q, Qin Y, Wang HT, Chen PY, Ma L, Fu XK, Zhu L, Wei HL#, and Yu SX#. Deficiencies in the formation and regulation of anther cuticle and tryphine contribute to male sterility in cotton PGMS line. BMC Genomics, 2020, 21: 825. IF=3.969, 中科院SCI期刊分区：生物学2区。

9. Tang ML*, Wu XC, Cao YF, Qin Y, Ding MQ, Jiang YR, Sun CD, Zhang H, Paterson AH, and Rong JK#. Preferential insertion of a Ty1 LTR-retrotransposon into the A sub-genome's HD1 gene significantly correlated with the reduction in stem trichomes of tetraploid cotton. Molecular Genetics and Genomics, 2020, 295: 47-54. IF=3.291, 中科院SCI期刊分区：遗传学3区。

10. Sun HR*, Hao PB, Ma Q, Zhang M, Qin Y, Wei HL, Su JJ, Wang HT, Gu LJ, Wang NH, Liu GY, and Yu SX#. Genome-wide identification and expression analyses of the pectate lyase (PEL) gene family in cotton (Gossypium hirsutum L.). BMC Genomics, 2018, 19: 661. IF=3.501, 中科院SCI期刊分区：生物学2区。

11. Ding MQ*, Ye WW*, Lin L, He S, Du X, Chen A, Cao YF, Qin Y, Yang F, Jiang Y, Zhang H, Wang X, Paterson AH#, and Rong JK#. The Hairless Stem Phenotype of Cotton (Gossypium barbadense) Is Linked to a Copia-Like Retrotransposon Insertion in a Homeodomain-Leucine Zipper Gene (HD1). Genetics, 2015, 201: 143-154. IF=5.963, 中科院SCI期刊分区：生物学2区。